| Formation | |
| 2008 - 2012 |
Université de Rennes 1
Doctorat spécialité Mathématiques et Applications. Sujet : Modèles réduits et hybrides de réseaux de reactions biochimiques. Applications à la modélisation du cycle cellulaire Maîtres de thèse : Pr. Ovidiu Radulescu & Pr. Nathalie Theret |
| 2006 - 2008 |
Université de Rennes 1 Master Bioinformatique (Major de Promotion) |
| 2004 - 2006 |
Université de Rennes 1 Master Informatique (1ère année) |
| 2003 - 2004 |
Université de Rennes 1 Licence Informatique |
| 2001 - 2003 |
Université de La Rochelle IUT Informatique, spécialité Systèmes Embarqués |
| Expérience | |
| 2021 - actuellement |
Institut Curie, U900
Research engineer in the Computational Systems Biology of Cancer's team |
| 2018 - 2021 |
Institut Curie, U900
Postdow fellow in the Computational Systems Biology of Cancer's team |
| 2014 - 2018 |
Instituto Butantan, Laboratório Especial de Toxinologia Aplicada (LETA).
Pós-Doutorado no Centro de Toxinas, Resposta-Imune e Sinalização Celular |
| 2009 (3 mois) |
NCBS, Bangalore (Programme de mobilité internationale des doctorants) Modélisation de l'interaction entre la voie TGFB et le facteur de transcription NF-kB dans le contexte du cancer du col de l'uterus |
| 2008 (6 mois) |
IRISA, Rennes (Stage de Master 2) Développement d'un algorithme de réduction de modèles biologiques, application au module de signalisation du NF-kB |
| 2007 (3 mois) |
CNRS UMR 6026, Rennes (Stage de Master 1) Développement d'un outil de recherche de sites de fixation de facteur de transcription intégrant la méthode des empreintes phylogénétiques |
| 2003 (3 mois) |
EIGSI, La Rochelle (Stage de DUT) Développement d'un système de régulation numérique |
| Conférences and Workshops | |
| September 2021 |
Basel, BC2 MaBoSS: SBML-qual compatibility and a web interface for performing simulations (Talk). |
| March 2021 |
EuroHPC Summit Week 2021 / PRACEdays21 HPC enabled multiscale simulations to uncover mechanistic insights in the COVID19 infection (Poster). |
| November 2020 |
Disease Map Community Meeting 2020 PhysiBoSS-COVID: the Boolean modelling of COVID-19 signalling pathways in a multicellular simulation framework allows for the uncovering of mechanistic insights (Poster) |
| September 2020 |
CMSB 2020 Synthesis and Simulation of Ensembles of Boolean Networks for Cell Fate Decision (Talk, with Stéphanie Chevalier) |
| September 2020 |
ECCB 2020 Stochastic quantification of reachability with MaBoSS (Talk) |
| October 2019 |
Blacksburg, International Conference for Systems Biology (ICSB) Ensemble Boolean modeling: example of a model of tumor invasion (Poster). |
| September 2019 |
Basel, BC2 MaBoSS Ecosystem (Talk, with Gautier Stoll) |
| October 2017 |
São Pedro, X-Meeting SigNetSim : A web platform for building and analyzing mathematical models of molecular signaling networks; Dynamical model of the Ras-mediated AP-1 activation in mouse Y1 adrenocortical tumor cells (Posters) |
| August 2017 |
Blacksburg, International Conference for Systems Biology (ICSB) SigNetSim : A web platform for building and analyzing mathematical models of molecular signaling networks (Poster) |
| November 2016 |
Belo Horizonte, X-Meeting SigNetSim : A web-based framework for designing kinetic models of molecular signaling networks, Hierarchical Model of the Ras-MAPK signalling pathway in mouse Y1 adrenocortical tumor cells (Posters) |
| September 2016 |
Newcastle, COMBINE SigNetSim : A web-based framework for designing kinetic models of molecular signaling networks (Talk) |
| September 2016 |
Barcelona, International Conference for Systems Biology SigNetSim : A web-based framework for designing kinetic models of molecular signaling networks (Poster) |
| November 2015 |
São Paulo, X-Meeting SigNetSim: an e-Science framework to design and analyse dynamical models of molecular signaling networks (Poster) |
| August 2015 |
Foz de Iguacu, International Congress of the International Union of Biochemistry and Molecular Biology SigNetSim: Design and analysis of dynamical models of biochemical reaction networks (Poster) |
| April 2015 |
São Paulo, Symmetry and Dynamics in Biology 2015 Design and analysis of dynamical models of biochemical reaction networks (Talk) |
| November 2014 |
Belo Horizone, X-Meeting SigNetSim: an e-Science framework to assist the design of kinetic models of molecular signaling networks (Poster) |
| September 2014 |
Melbourne, International Conference for Systems Biology (ICSB) Mathematical modeling of the crosstalk between Ras/MAPK and PI3K/AKT signaling pathways in the K-Ras-driven mouse Y1 adrenocortical tumor cells provides insights into the mechanisms of FGF2-driven cell cycle arrest (Poster) |
| Septembre 2013 |
Taormina, Workshop Hybrid Systems and Biology 2013 A hybrid mammalian cell cycle model (Présentation) |
| Juillet 2012 |
CECAM, Lausanne, Workshop Towards in silico biological cell : Bridging experiments and simulations Piecewise smooth hybrid systems as models for networks in molecular biology (Poster) |
| Septembre 2011 |
Max Planck - Institute für Informatics, Saarbrücken, Workshop on Algorithm in Bioinformatics Piecewise smooth hybrid systems as models for networks in molecular biology (Présentation) |
| Mars 2011 |
Cold Spring Harbour Laboratory, Computational Cell Biology Meeting Piecewise smooth hybrid systems as models for networks in molecular biology (Poster) |
| Septembre 2010 |
Montpellier, Journées ouvertes en Biologie, Informatique et Mathématiques Piecewise smooth hybrid systems as models for biochemical reaction networks (Présentation) |
| Mai 2010 |
Evry, Modélisation des systèmes biologiques complexes dans le contexte de la génomique, Thematic research school Modelling TGFB-dependent NF-kB response in cervical cancer cell lines (Poster) |
| Juillet 2009 |
Max Plank - Institute for Genetics - Berlin, MPI-CNRS Meeting - Robustness by dynamical transitions Modelling TGFB-dependent NF-kB response in cervical cancer cell lines (Présentation) |
| Compétences | |
| Informatique |
Programmation (C/C++, Java, Python, Assembleur, ...) Algorithmique, Structures de données, Parallèlisation, Systèmes |
| Mathématiques |
Modelisation mathématique des systèmes biologiques Systèmes dynamiques différentiels et hybrides, Analyse tropicale Optimisation non-linéaire Statistiques (Apprentissage et classification) Théorie des jeux |
| Biologie |
Biologie des systèmes (Modélisation de voies de signalisation et du cycle cellulaire) Bioinformatique (Algorithes des séquences, Phylogénie) Biologie cellulaire |
| Vincent Noël |
|